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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910416.1_cds_XP_016460452.1_53873
CDS Infomation

[gene=LOC107783942] [db_xref=GeneID:107783942] [protein=laccase-12-like] [protein_id=XP_016460452.1] [location=join(32153..32275,32376..32527,32641..32885,32981..33109,33185..34141,34224..34354)] [gbkey=CDS]
Sequence

ATGCAGGGCTTCAACATGAGCATTGCCAACCCTTTGCGCTCTTTGTTAATCTATGGCATT
TTGCTTCTTTTTGCAAATGCTGTGTCTTTAGCAAAAGCAAAAATCCACAACCACGATTTT
GTTATTCAAGCAACGCCAGTAAAGAGGCTGTGCAATACGCGCAGCACCATAACAGTGAAT
GGACAATTTCCCGGACCAACTTTGGAAGTGAACAATGGAGATACTCTAGTTGTCAAAGTT
GTCAATAGAGCTCAGTATAATGTCACCATTCATTGGCATGGGGTGAGGCAAATGAGAACA
GCATGGGCAGATGGACCAGAATTTATCACTCAATGTCCAATAAGACCAGGAGGGAGTTAC
ACTTATCGGTTTACAATTCAAGGACAGGAAGGCACACTTTGGTGGCACGCCCACAGCTCA
TGGCTCAGGGCCACTGTTTATGGAGCCTTAGTTATCCACCCTAAAGAAGGAACTTCCTAC
CCTTTTCCTAAGCCCAAAAGAGAAACACCTATTCTTCTTGGTGAGTGGTGGGATGCAAAC
CCCATTGATGTTATTAGACAAGCCACACGAACAGGAGCAGCGCCTAATGTATCTGATGCT
TACACTATCAATGGTCAACCAGGTGATCTTTACAAGTGTTCTAGTCAAGATACTATGATA
GTCCATGTGGATTCTGGTGAAACGAACCTCCTTCGTGTCATCAACGCTGGACTCAACCAA
CAACTTTTCTTCACAGTAGCCAACCACAAGTTTACTGTTGTTGGAGCAGATGCATCTTAT
GTTAAACCTTTCACCACATCAGTCATTATGCTAGGACCAGGCCAAACTACTGATGTCCTC
ATCACAGCAAACCAACCACCAGCCCGATATTACATGGCTGCGCGCGCCTATGCAAGTGCT
CAAGGTGCACCCTTTGACAATACCACCACCACAGCCATACTAGAATACAAAGCTGCTCCT
TGCCCTGCCAAAGGTGTCAAAATCAATCCAGTTCTCCCATCTCTGCCCGCATTTAATGAC
ACTGCTTCTGCCACTACCTTCACATCCAGTTTCAGGAGCGCAAGAAAAGTTGAAGTCCCA
ACTGAAATCGACGAAAATCTGTTCTTCACAGTTGGATTAGGACTCAACAATTGCCCTGCA
GGGGCAAGCTCCAGCAGCTGTCAAGGTCCAAATGGAACGCGATTCACTGCTAGTATGAAC
AACGTGTCATTTGTACTACCATCTAATTTCTCCCTACTTCAGGCTCATCACCAGGGGATA
CCTGGAGTTTTCTCAACTGATTTTCCAGCAGTTCCACCAGTTAAATTCGATTACACAGGG
AACGTGAGCAGGTCACTCTGGCAACCTATTTCAGCAACTAAATTATACAAGTTAAGATAT
GGTGCGAGAGTGCAAATTGTGTTACAGGGAACTAGTATATTCACAGCTGAAAATCACCCA
ATTCATCTTCACGGTTATGATTTTTACATTCTTGCTGAGGGATTTGGGAATTTCAATCCA
CAAACTGATACTGCTAAATTCAACCTTGTCGATCCACCTCTTCGTAATACTGCAAGTGTA
CCAGTTAATGGATGGTCCGTCATTAGATTCGTCGCTGATAATCCAGGAGTTTGGATAATG
CATTGTCACTTGGATGTGCATATTACTTGGGGTTTGGCCATGGCTTTCCTCGTCGAAAAT
GGAGTTACTGAATTGGAAGCATTGGAGGAACCTCCAGTTGATCTTCCTGTCTGTTAA

Peptide Sequence

PEP ID

XP_016460452.1
PEP Infomation

PREDICTED: laccase-12-like [Nicotiana tabacum]
Sequence

MQGFNMSIANPLRSLLIYGILLLFANAVSLAKAKIHNHDFVIQATPVKRLCNTRSTITVN
GQFPGPTLEVNNGDTLVVKVVNRAQYNVTIHWHGVRQMRTAWADGPEFITQCPIRPGGSY
TYRFTIQGQEGTLWWHAHSSWLRATVYGALVIHPKEGTSYPFPKPKRETPILLGEWWDAN
PIDVIRQATRTGAAPNVSDAYTINGQPGDLYKCSSQDTMIVHVDSGETNLLRVINAGLNQ
QLFFTVANHKFTVVGADASYVKPFTTSVIMLGPGQTTDVLITANQPPARYYMAARAYASA
QGAPFDNTTTTAILEYKAAPCPAKGVKINPVLPSLPAFNDTASATTFTSSFRSARKVEVP
TEIDENLFFTVGLGLNNCPAGASSSSCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQGI
PGVFSTDFPAVPPVKFDYTGNVSRSLWQPISATKLYKLRYGARVQIVLQGTSIFTAENHP
IHLHGYDFYILAEGFGNFNPQTDTAKFNLVDPPLRNTASVPVNGWSVIRFVADNPGVWIM
HCHLDVHITWGLAMAFLVENGVTELEALEEPPVDLPVC

Transcript Sequence

Gene sequence data has not been registered.